BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A05SP1|AL425055
(565 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig566 749 0.0
>3x_Contig566
Length = 2053
Score = 749 bits (376), Expect = 0.0
Identities = 398/407 (97%), Gaps = 2/407 (0%)
Strand = Plus / Plus
Query: 1 cctagaaataatgayaaaatatgcttatcagttgcccaagtaccgaaaagtgccacccag 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1649 cctagaaataatgacaaaatatgcttatcagttgcccaagtaccgaaaagtgccacccag 1708
Query: 61 tagggatcgttcattcgtatcagacactcaaccccatcaacgtcatttgttcgtttggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1709 tagggatcgttcattcgtatcagacactcaaccccatcaacgtcatttgttcgtttggca 1768
Query: 121 tcattaatcaattgtgtgacaaccgcttgtccaggaaccgtggtaaaaagagcaatgacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1769 tcattaatcaattgtgtgacaaccgcttgtccaggaaccgtggtaaaaagagcaatgacg 1828
Query: 181 agtttttctaacagtacgctctcatcaacatccgaatcggccaaamataatcgctgaaca 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1829 agtttttctaacagtacgctctcatcaacatccgaatcggccaaaaataatcgctgaaca 1888
Query: 241 gaactcttttcctgtagcatggtaaattggaatgcgtatgcmaattacacggcgctagag 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1889 gaactcttttcctgtagcatggtaaattggaatgcgtatgcaaattacacggcgctagag 1948
Query: 301 aaaagggttttctctatagtccagaagagtgagtcttaaaacaaaacaaacgaccgatac 360
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1949 aaaagggttttctctatagtccagaagagtgagtcttaaa--caaacanacgaccgatac 2006
Query: 361 cagggtaagcagtagcagctcttccgttcgttcctcttcactgactc 407
||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2007 cagngtaagcagtagcagctctttcgttcgttcctcttcactgactc 2053
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,542
Number of Sequences: 1807
Number of extensions: 11542
Number of successful extensions: 2651
Number of sequences better than 1.0e-20: 1
length of query: 565
length of database: 10,358,551
effective HSP length: 16
effective length of query: 549
effective length of database: 10,329,639
effective search space: 5670971811
effective search space used: 5670971811
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)